Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834182.1_cds_XP_016505502.1_18839
CDS Infomation

[gene=LOC107823380] [db_xref=GeneID:107823380] [protein=WD repeat-containing protein 44-like] [protein_id=XP_016505502.1] [location=join(139112..140266,140348..140438,140540..140697,140787..140838,141564..141643,141738..141831,141931..142478)] [gbkey=CDS]
Sequence

ATGGGAACTTACAGTGAGACTGAAGAAGATACTTTCTTTGATATACGTGATGAGATTAGT
TCTCTCTCTGATTTGGGTTCGGATAGTTCTGATGCTTGTACTCGTAATGAGATTGTTGAC
TGTGCTTTGGGATATGAATTTTGGACTCAGGATCCTGAAAGTGTTGATGAACGTCGCAAT
AGATTCTTGAAATGGATGGGTTTGAACTCGAACTGTGACAGACGTGATGGACTTGAAATG
AATGGTGTATGCTCTGATGAAAGCAAGAAGAATGCCGATAGAATTAGGGATGGCAATGAC
ACTGTGCTCGCAAACTCAGATTCCGAAGGCAACTTTTTCTCCGGTCGATCTTCCCAGTCA
AATGAAGCTTTGGAATTGGAGGAGGATGCTGTAGAGGATCCAATGTGTTGGAAAATTAGG
AATCTGGACAACGGATCAGAGTTTGTTGCGGATGAGTTGGGACAGGATGGGATGCTTAGC
CGATTACGTGAAGTAGGTACAAACAGGTTATTCACTATTGAAGAGTTTCAGAGAAATCTT
GGCTCATCGGCTTTGATTCAGCAATTGCTGCACAGAGATATTAAGGGATTCAATATGGTT
GATACAAAGTCGAAAGTGAGAAGTTTGCTTCAAAAACTCACGATTTCCACCCGACATAAA
GAGAGGACAAAGGGAGTCCAATCGACTGCCCGGGAGTTTAATTTAAAGTCGGGGGTTGGT
AGTCAAAGAGTTCGGGTCCACACCAGTAAGAAGGAGTCAAAAGAACTGTCCTCGCTTTAC
ACAGGCCAAGAGTTCCTTGCACATGAAGGCTCTATCATAACAATGAAGTTCAGTCCTTGT
GGCCAATACTTGGCAAGTGCGGGCAAAGATGGCACGGTGCGCATTTGGAGAGTGACCGAA
GATGATATTCCTAAAGATTTTAATGTTCAAGATGTTGACCCCTCTTGTTTATACTTCTCA
CTGAATCATTTGTCCAAATTAGTTTCGCTCAATGACTATAAAGAGAAGATCAGCGGGATG
AAAATGATGAGAAAATCATCGGAATCTGCTTGTGTTGTCCTCCCACCAAAGTTATTCCGG
ATAATGGAGAAACCACTGCACGAGTTCCATGGGCATACGGGTGAAGTCTTGGCCCTCTCA
TGGTCCAAAAATGGGTATCTGCTGTCATCTTCTGTGGATAAAACAGCTCGTCTCTGGCAA
GTAGGACATGATAAATGCGTTGGTGTGTACTCGCATAATAATTATGTCACTTGTGTAGAA
TTCAATCCCATGGATGATAATTTTTTCATTAGTGGCTCGATAGATGGGAAAATACGACTC
TGGGACGTGCACGGTTGTCGAGTAATTGATTGGACTGATTTAAAAGAAATAGTGACTGCT
GTTTGTTATTGTCCTGATGGAAAGGGGGGTGTTGTGGGATACATGGATGGCAATTGCCGT
TTTTATGATGTAGTAGGTAATCGTTTACAGATGGGCTCGCAGGTATGCCTGCAAGAAAAG
AAGAAGCTTACTAACAAGAGAGTAACCGGATTTCAGTACTGCCCGAACGACTCAAGCAAA
GTCATGGTTACTTCTGCTGATTCACAAGTTCGAATACTTTCTGGATCCAACATCATCTGT
AAATTCAAAGGAACTCAAAATTTGGGTAGTCAATGTCCTGCATCATTCACTTCCGATGGG
AAACACATTCTCGCGGTTACTGAGGATTCAAATGTTTATATCTGGAACTATAGTAATGAG
GACGGGACAACTAGCCAAGCAAAGAAAGTCCGGTCATCTGAGAGTTTCCTTTCCCAAAAT
GCATCGGTTACAATACCATGGTGTGGCTTTAAAACCAATCCCGGGACACTATCACCAGGA
AGTGTTTTAGCAAATGGTGATGTCAACGAGAACTCGCAGCCAAAGACTTCATCTTTACAA
GATTGCTTCTCCTTGGGACGTGCGTCTTTCTTGGATTCACTATTAAAGGGCTCTCCAACG
TGGCCGGAGGAGAAATTGCCCGATTCAAATCCAGCAAATGCATCCCCTTCTATATCTAAA
TCCGAATGCAAGATCTTGAAGAGTGCTTGGCAAAGTGCATTGAGTTCGAGCCATTTGTGG
GGTCTTGTGGTTGTCACTGCCGGATGGGACGGATGCATTAGAACATTCCTCAACTATGGA
TTGCCAATTCGTTTATGA

Peptide Sequence

PEP ID

XP_016505502.1
PEP Infomation

PREDICTED: WD repeat-containing protein 44-like [Nicotiana tabacum]
Sequence

MGTYSETEEDTFFDIRDEISSLSDLGSDSSDACTRNEIVDCALGYEFWTQDPESVDERRN
RFLKWMGLNSNCDRRDGLEMNGVCSDESKKNADRIRDGNDTVLANSDSEGNFFSGRSSQS
NEALELEEDAVEDPMCWKIRNLDNGSEFVADELGQDGMLSRLREVGTNRLFTIEEFQRNL
GSSALIQQLLHRDIKGFNMVDTKSKVRSLLQKLTISTRHKERTKGVQSTAREFNLKSGVG
SQRVRVHTSKKESKELSSLYTGQEFLAHEGSIITMKFSPCGQYLASAGKDGTVRIWRVTE
DDIPKDFNVQDVDPSCLYFSLNHLSKLVSLNDYKEKISGMKMMRKSSESACVVLPPKLFR
IMEKPLHEFHGHTGEVLALSWSKNGYLLSSSVDKTARLWQVGHDKCVGVYSHNNYVTCVE
FNPMDDNFFISGSIDGKIRLWDVHGCRVIDWTDLKEIVTAVCYCPDGKGGVVGYMDGNCR
FYDVVGNRLQMGSQVCLQEKKKLTNKRVTGFQYCPNDSSKVMVTSADSQVRILSGSNIIC
KFKGTQNLGSQCPASFTSDGKHILAVTEDSNVYIWNYSNEDGTTSQAKKVRSSESFLSQN
ASVTIPWCGFKTNPGTLSPGSVLANGDVNENSQPKTSSLQDCFSLGRASFLDSLLKGSPT
WPEEKLPDSNPANASPSISKSECKILKSAWQSALSSSHLWGLVVVTAGWDGCIRTFLNYG
LPIRL

Transcript Sequence

Gene sequence data has not been registered.